Name: imagej
Version: 1.53r
Release: 1%{?dist}
Summary: Image Processing and Analysis in Java
License: Public Domain
URL: https://rsbweb.nih.gov/ij/index.html
Source0: https://rsbweb.nih.gov/ij/download/src/ij%(echo '%{version}' | tr -d .)-src.zip
Source1: imagej.desktop
Source2: https://rsbweb.nih.gov/ij/macros/macros.zip
Source3: https://rsb.info.nih.gov/ij/download/linux/unix-script.txt
Source4: imagej.png
BuildArch: noarch
# Do not copy class files.
Patch: imagej-1.53r-do-not-copy-class-files.patch
# Modify imagej.sh (as intended by upstream) for Fedora compatibility.
Patch: imagej-1.53r-unix-script.patch
# Set javac source / target version to 1.8 to fix building with Java 11.
Patch: imagej-1.53r-source-target-version.patch
BuildRequires: ant
BuildRequires: desktop-file-utils
BuildRequires: jpackage-utils
BuildRequires: java-devel
Requires: jpackage-utils
# Require java-devel, not only java, for plugins build
Requires: java-devel
# We no longer package javadoc documentation because it has guidelines issues
# pertaining to bundled and pre-minified JavaScript and CSS. See
# https://bugzilla.redhat.com/show_bug.cgi?id=2006555 and the linked
# “packaging” mailing list discussion for similar issues in documentation
# generated by Sphinx and Doxygen.
Obsoletes: imagej-javadoc < 1.53r-1
%description
ImageJ is a public domain Java image processing program. It can display, edit,
analyze a wide variety of image data, including image sequences. Imagej can be
used for quantitative analysis of engineering and scientific image data.
%prep
%autosetup -c -N
unzip -qq -u '%{SOURCE2}'
cp -p '%{SOURCE3}' ./imagej.sh
# Erase binary and useless files
rm -rvf macros/.FBC* macros/build.xml __MACOSX
# Strip out any bundled pre-compiled class or jar files:
find . \( -name '*.class' -o -name '*.jar' \) -print -delete
# Fix permissions
find macros -type d -exec chmod -v 0755 '{}' '+'
find macros -type f -exec chmod -v 0644 '{}' '+'
%autopatch -p1
# Replace placeholders in our patched unix-script.txt/imagej.sh.
sed -r -i \
-e 's#@JAVADIR@#%{_javadir}#' \
-e 's#@PKGDATADIR@#%{_datadir}/imagej#' \
imagej.sh
%build
cd source
ant build
cd ..
%install
# install jar
install -p -m 0644 -D source/ij.jar '%{buildroot}%{_javadir}/imagej.jar'
# install icon
install -D -p -m 0644 -t '%{buildroot}%{_datadir}/pixmaps' '%{SOURCE4}'
# install data files and macros
install -D -p -m 0644 -t '%{buildroot}%{_datadir}/imagej' \
source/build/about.jpg source/build/IJ_Props.txt
cp -rvp macros '%{buildroot}%{_datadir}/imagej/'
# install directories for luts and plugins
install -d '%{buildroot}%{_datadir}/imagej/luts' \
'%{buildroot}%{_datadir}/imagej/plugins'
# install -p -m 0644 source/plugins/JavaScriptEvaluator.source \
# '%%{buildroot}%%{_datadir}/imagej/plugins/JavaScriptEvaluator.java'
# install script
install -D -p imagej.sh '%{buildroot}%{_bindir}/imagej'
# desktop file
desktop-file-install --vendor='' \
--dir=%{buildroot}%{_datadir}/applications/ \
%{SOURCE1}
%files
%doc source/aREADME.txt source/release-notes.html
%{_javadir}/imagej.jar
%{_datadir}/imagej/
%{_datadir}/applications/imagej.desktop
%{_datadir}/pixmaps/imagej.png
%{_bindir}/imagej
%changelog
* Mon May 30 2022 Benjamin A. Beasley <code@musicinmybrain.net> - 1.53r-1
- Adjust versioning scheme
- Update to 1.53r (close RHBZ#1609549)
- Use HTTPS URLs
- Reduce macro indirection in the spec file
- Drop javadoc API documentation due to bundled JavaScript and CSS
* Sat Feb 05 2022 Jiri Vanek <jvanek@redhat.com> - 1.50-17.h
- Rebuilt for java-17-openjdk as system jdk
* Thu Jan 20 2022 Fedora Release Engineering <releng@fedoraproject.org> - 1.50-16.h
- Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild
* Thu Jul 22 2021 Fedora Release Engineering <releng@fedoraproject.org> - 1.50-15.h
- Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild
* Tue Jan 26 2021 Fedora Release Engineering <releng@fedoraproject.org> - 1.50-14.h
- Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild
* Tue Oct 06 2020 Ankur Sinha <ankursinha AT fedoraproject DOT org> - 1.50-13.h
- Remove -dxx option from script (unsupported in java 11)
- Fix patch
* Tue Jul 28 2020 Fedora Release Engineering <releng@fedoraproject.org> - 1.50-12.h
- Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild
* Sun Jul 19 2020 Fabio Valentini <decathorpe@gmail.com> - 1.50-11.h
- Set javac source and target to 1.8 to fix Java 11 builds.
* Fri Jul 10 2020 Jiri Vanek <jvanek@redhat.com> - 1.50-10.h
- Rebuilt for JDK-11, see https://fedoraproject.org/wiki/Changes/Java11
* Wed Jan 29 2020 Fedora Release Engineering <releng@fedoraproject.org> - 1.50-9.h
- Rebuilt for https://fedoraproject.org/wiki/Fedora_32_Mass_Rebuild
* Thu Jul 25 2019 Fedora Release Engineering <releng@fedoraproject.org> - 1.50-8.h
- Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild
* Fri Feb 01 2019 Fedora Release Engineering <releng@fedoraproject.org> - 1.50-7.h
- Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild
* Fri Jul 13 2018 Fedora Release Engineering <releng@fedoraproject.org> - 1.50-6.h
- Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
* Wed Feb 07 2018 Fedora Release Engineering <releng@fedoraproject.org> - 1.50-5.h
- Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild
* Thu Jan 11 2018 Igor Gnatenko <ignatenkobrain@fedoraproject.org> - 1.50-4.h
- Remove obsolete scriptlets
* Wed Jul 26 2017 Fedora Release Engineering <releng@fedoraproject.org> - 1.50-3.h
- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild
* Fri Feb 10 2017 Fedora Release Engineering <releng@fedoraproject.org> - 1.50-2.h
- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild
* Sat Mar 26 2016 Adam Huffman <bloch@verdurin.com> - 1.50-1.h
- Update to upstream release 1.50h
* Thu Feb 04 2016 Fedora Release Engineering <releng@fedoraproject.org> - 1.48-8.e
- Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild
* Sat Jul 04 2015 Adam Huffman <bloch@verdurin.com> - 1.48-7.e
- Apply Java docdir fixes from Michael Simacek
* Wed Jun 17 2015 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.48-6.e
- Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild
* Wed Aug 13 2014 Adam Huffman <bloch@verdurin.com> - 1.48-5.e
- Fix bogus dates in changelog
* Wed Aug 13 2014 Adam Huffman <bloch@verdurin.com> - 1.48-4.e
- Fix desktop file to ensure application appears in menus
* Mon Jul 14 2014 Richard Hughes <richard@hughsie.com> - 1.48-3.e
- Ship a larger application icon so the metdata parser can include the app.
* Sat Jun 07 2014 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.48-2.e
- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_Mass_Rebuild
* Sat Oct 26 2013 Adam Huffman <bloch@verdurin.com> - 1.48-1.e
- Update to 1.48e
* Sun Aug 25 2013 Adam Huffman <bloch@verdurin.com> - 1.47-1.v
- Update to 1.47v
* Sat Aug 03 2013 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.46-4.d
- Rebuilt for https://fedoraproject.org/wiki/Fedora_20_Mass_Rebuild
* Thu Feb 14 2013 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.46-3.d
- Rebuilt for https://fedoraproject.org/wiki/Fedora_19_Mass_Rebuild
* Thu Jul 19 2012 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.46-2.d
- Rebuilt for https://fedoraproject.org/wiki/Fedora_18_Mass_Rebuild
* Wed Jan 11 2012 Adam Huffman <verdurin@fedoraproject.org> - 1.46-1.d
- update to 1.45d
* Wed Feb 09 2011 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.44-2.i
- Rebuilt for https://fedoraproject.org/wiki/Fedora_15_Mass_Rebuild
* Sat Oct 30 2010 Georget Fabien <fabien.georget@gmail.com> 1.44-1.i
- update to 1.44i
- create imagej.jar link
* Tue Sep 28 2010 Georget Fabien <fabien.georget@gmail.com> 1.44-1.h
- version 1.44h
* Fri Dec 11 2009 Georget Fabien <fabien.georget@gmail.com> 1.43-1.m
- version 1.43m
* Sat Nov 21 2009 Georget Fabien <fabien.georget@gmail.com> 1.43-0.5.j
- set build directory to {name}-{version}
- modify wrapper script
- add java-devel to requires
* Sun Nov 15 2009 Georget Fabien <fabien.georget@gmail.com> 1.43-0.4.j
- modify name from ImageJ to imagej
- modify wrapper script for fedora compatibility
* Tue Nov 10 2009 Georget Fabien <fabien.georget@gmail.com> 1.43-0.3.j
- get macros from http://rsbweb.nih.gov/ij/macros/macros.zip
- get launch script from http://rsb.info.nih.gov/ij/download/linux/unix-script.txt
- don't copy macros in the jar but in /usr/share/ImageJ/macros
* Tue Nov 10 2009 Georget Fabien <fabien.georget@gmail.com> 1.43-0.2.j
- change group to Application/Engineering
- change description
- add comments
- change version tag
* Sat Nov 8 2008 Georget Fabien <fabien.georget@gmail.com> 1.43-0.1
- Creation